User Tools

Site Tools


Website under development…

Some of my tools

  • Mc2plan (authorized access required)

Radiotherapy planification assistant for contact therapy, using pre-computed Monte Carlo simulation.

Author: Olivier Croce
Programming Language: Penelope code (Fortran / C++) - PHP(gdgraph)/JavaScript/Python
Platform: WebService / OS independant

Check thermodynamical parameters for PCR primers and compute graphical representation to show specificity of target sequences

Author: Olivier Croce
Programming Language: PHP/MySQL/Ajax
Platform: WebService / OS independant
Publication : http://www.ncbi.nlm.nih.gov/pubmed/18440971


Blast server for the identification of procaryotes

Author: Olivier Croce
Programming Language: CGI/PHP/Ajax/HTML/JavaScript
Platform: WebService / OS independant
Publication : http://dx.doi.org/10.4172/1948-5948.1000029

A cgi tool to parse and extract data from EMBL entries to various formats

Author: Olivier Croce, Michael Lamarre
Programming Language: Perl/HTML/JavaScript
Platform: WebService / OS independant
Publication : http://www.ncbi.nlm.nih.gov/pubmed/16441875

e-Tool for data exchanges among partners, DNA chips design and developements

Author: Olivier Croce
Programming Language: PHP/MySQL/HTML/JavaScript
Platform: WebService / OS independant

scripting phylogenetic graphics

Author: François Chevenet, Olivier Croce
Programming Language: TCL/HTML/JavaScript
Platform: WebService / OS independant
Publication: http://www.ncbi.nlm.nih.gov/pubmed/20194627

  • RpoB sequences database
  • RpoC sequences database


RunE. A tool for a fast quality evaluation of NGS runs

Author: Nicolas Girard (Master trainee)
Programming Language: Python/LateX/HTML/Bash Platform: Linux

tools/tools.txt · Last modified: 2016/02/28 20:33 by olivier